Fig 5.

Mutation frequencies determined for each coding sequence and intergenic regions in the populations of Blaivillea yellow spot virus (BlYSV), Tomato common mosaic virus (ToCmMV), Tomato chlorotic mottle virus (ToCMoV), Tomato severe rugose virus (ToSRV), and Tomato yellow vein streak virus (ToYVSV). “ToCMoV Total” refers to the ToCMoV population from Florestal plus two isolates from Carandaí, “ToSRV Total” refers to the ToSRV populations from Carandaí and Florestal, and “ToCmMV Total” refers to the ToCmMV populations from Coimbra and Paty do Alferes. CP, coat protein; Ren, replication enhancer protein; Trap, trans-activating protein; Rep, replication-associated protein; MP, movement protein; NSP, nuclear shuttle protein; IR, intergenic or common region.