. 2013 May;87(10):5784–5799. doi: 10.1128/JVI.00155-13

Table 6.

Results of the different neutrality tests for each open reading frame in the DNA-A and DNA-B of viral isolates comprising populations of Blainvillea yellow spot virus, Tomato chlorotic mottle virus, Tomato common mosaic virus, Tomato severe rugose virus, and Tomato yellow vein streak virus from Rio de Janeiro and Minas Gerais states, Brazil^a

Population	ORF	Tajima's D	Fu and Li's D*	Fu and Li's F*
BlYSV (Viçosa)	CP	−1.517^§	−1.458	−1.608
	Rep	−1.296	−1.306	−1.429
	Trap	−0.799	−0.825	−0.889
	Ren	−1.160	−1.161	−1.253
	NSP	−1.197	−1.131	−1.270
	MP	−0.505	−0.298	−0.382
ToCmMV (Paty do Alferes)	CP	−1.562	−1.784	−1.934
	Rep	−1.562	−1.784	−1.934
	Trap	−1.667	−1.916	−2.076
	Ren	−1.401	−1.587	−1.719
	NSP	−1.677	−1.881	−2.039
	MP	−1.728^§	−1.943^§	−2.107
ToCmMV (Coimbra)	CP	−0.604	0.993	0.654
	Rep	−0.772	0.259	−0.013
	Trap	0.027	1.036	0.881
	Ren	0.065	1.433^§	1.226
	NSP	1.816	1.287	1.556
	MP	1.533	1.241	1.445
ToCMoV (Florestal)	CP	−1.973^§	−2.2557	−2.529
	Rep	−2.182^‡	−2.836^§	−3.078^†
	Trap	−1.608	−2.012	−2.191
	REn	−1.612	−0.687	−1.101
ToSRV (Carandaí)	CP	−2.282^‡	−3.168^†	−2.282^†
	Rep	−2.302^‡	−2.282^†	−2.282^†
	Trap	−2.010^§	−2.326	−2.587^§
	REn	−2.059^§	−2.456^§	−2.712^§
	NSP	−1.314	−1.310	−1.443
	MP	−0.999	−0.904	−1.016
ToSRV (Florestal)	CP	0.708	0.708	0.749
	Trap	0.243	0.243	0.239
	REn	1.459	1.459	1.431
	Rep	0.812	0.812	0.865
ToYVSV (Paty do Alferes)	CP	−2.135^§	−2.723^§	−2.969^§
	Rep	−2.156^†	−3.341^†	−3.483^†
	Trap	−1.369	−2.042	2.143
	REn	−1.706	−2.400	−2.560
	NSP	−1.495	−1.917	−2.057
	MP	−1.830^§	−2.060	−2.272

BlYSV, Blainvillea yellow spot virus; ToCMoV, Tomato chlorotic mottle virus; ToCmMV, Tomato common mosaic virus; ToSRV, Tomato severe rugose virus; ToYVSV, Tomato yellow vein streak virus; CP, coat protein; Rep, replication-associated protein; Trap, trans-activating protein; Ren, replication enhancer protein; NSP, nuclear shuttle protein; MP, movement protein;

^§

, significant value that rejects the null hypothesis of selective neutrality (P < 0.05);

^†

, significant value that rejects the null hypothesis of selective neutrality (P < 0.02);

^‡

, significant value that rejects the null hypothesis of selective neutrality (P < 0.01).