Table 1.
RT-qPCR TaqMan probes for gene expression analysis
| Primers | Gene accession no. | Assay identification no. | Gene product or function |
|---|---|---|---|
| GAPDH | NM_002046.3 | Hs99999905_m1 | Glyceraldehyde-3-phosphate dehydrogenase |
| CDC42 | NM_001791.3 | Hs03044122_g1 | Cell division cycle 42 (GTP binding protein, 25 kDa) |
| COPZ1 | NM_016057.1 | Hs00255433_m1 | Coatomer protein complex, subunit zeta 1 |
| CSK | NM_001127190.1 | Hs01062579_g1 | c-src tyrosine kinase |
| CYP1A1 | NM_000499.3 | Hs01054797_g1 | Cytochrome P450, family 1, subfamily A, polypeptide 1 |
| DDX3X | NM_001356.3 | Hs00606179_m1 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked |
| DICER1 | NM_030621.3 | Hs00998582_g1 | Dicer 1, RNase type III |
| EIF2S3 | NM_001415.3 | Hs00831673_gH | Eukaryotic translation initiation factor 2, subunit 3 gamma, 52 kDa |
| FBXL2 | NM_012157.3 | Hs00247211_m1 | F-box and leucine-rich repeat protein 2 |
| HAMP | NM_021175.2 | Hs01057160_g1 | Hepcidin antimicrobial peptide |
| JAK1 | NM_002227.2 | Hs01026996_m1 | Janus kinase 1 |
| LTΒ | NM_009588.1 | Hs00242739_m1 | Lymphotoxin beta (TNF superfamily, member 3) |
| MAP2K7 | NM_145185.2 | Hs00178198_m1 | Mitogen-activated protein kinase kinase 7 |
| NFKB2 | NM_001077493.1 | Hs00174517_m1 | Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) |
| NUAK2 | NM_030952.1 | Hs00388292_m1 | NUAK family, SNF1-like kinase, 2 |
| PI4KA | NM_058004.2 | Hs00176931_m1 | Phosphatidylinositol 4-kinase |
| PI4KB | NM_002651.1 | Hs00356327_m1 | Phosphatidylinositol 4-kinase, catalytic, beta |
| PPIA | NM_021130.3 | Hs99999904_m1 | Peptidylprolyl isomerase A (cyclophilin A) |
| RELA | NM_001145138.1 | Hs00153294_m1 | v-rel reticuloendotheliosis viral oncogene homolog A |
| SLC12A4 | NM_001145961.1 | Hs00957122_m1 | Solute carrier family 12 (potassium/chloride transporters), member 4 |
| SLC12A5 | NM_001134771.1 | Hs00221168_m1 | Solute carrier family 12 (potassium-chloride transporter), member 5 |
| TBXA2R | NM_201636.2 | Hs00169054_m1 | Thromboxane A2 receptor |
| TRAF2 | NM_021138.3 | Hs00184186_m1 | TNF receptor-associated factor 2 |
| TXNIP | NM_006472.3 | Hs01006900_g1 | Thioredoxin interacting protein |
| VAPA | NM_194434.2 | Hs00427749_m1 | VAMP (vesicle-associated membrane protein)-associated protein A, 33 kDa |
| VAPB | NM_004738.3 | Hs00191003_m1 | VAMP (vesicle-associated membrane protein)-associated protein B and C |
| VRK1 | NM_003384.2 | Hs00177470_m1 | Vaccinia related kinase 1 |
| IL-8 | NM_000584.2 | Hs99999034_m1 | Interleukin 8 |
| PLK1 | NM_005030.3 | Hs00983233_g1 | Polo-like kinase 1 |