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| Number of sequence variants called | |||
| Variant type | Accessible genome (2136 kb) | Non-coding (1480 kb) | Coding (656 kb) |
| Di-nucleotide SNPs | 105,812 | 84,454 | 25,358 |
| Tri-SNPs | 5,304 | 4,097 | 1,207 |
| Tetra-SNPs | 96 | 66 | 30 |
| Indels | 13,094 | 12,641 | 453 |
| MNPs | 4,850 | 4,084 | 766 |
| Total | 129,156 | 101,342 | 27,814 |
| Average variant density | 1/16.5 bp | 1/14.6 bp | 1/23.6 bp |
