Table 3.

Population-based association between VL and Chromosome 6q27 SNPs. Results are shown for logistic regression analyses under an additive model comparing VL cases and controls. OR = odds ratio; L95 and U95 are lower and upper 95% confidence intervals. Allele counts are shown for minor/major allele for affected and unaffected individuals. Bold indicates single SNPs for which allelic association at nominal P≤ 0.05 was observed.

Variant	Minor Allele	AFF	UNAFF	OR	L95	U95	P
PHF10_rs4073926	A	880/1002	958/1024	0.94	0.83	1.07	0.33
PHF10_rs6459655	G	566/1316	604/1376	0.98	0.86	1.12	0.77
C6orf70_rs4145078	G	581/1297	644/1338	0.93	0.82	1.07	0.31
C6orf70_rs4716396	C	582/1298	645/1339	0.93	0.82	1.07	0.31
C6orf208_rs926714	G	591/1289	668/1316	0.91	0.79	1.03	0.14
DLL1_rs1028488	C	665/1217	728/1252	0.94	0.82	1.07	0.35
DLL1_rs1033583	C	470/1400	478/1480	1.04	0.90	1.20	0.62
DLL1_rs1884190	G	159/1719	134/1844	1.27	1.00	1.61	0.05
DLL1_rs2738820	T	688/1188	773/1211	0.91	0. 80	1.03	0.14
DLL1_rs9459988	G	134/1748	111/1873	1.29	1.00	1.68	0.05
DLL1_rs17860704	G	359/1523	339/1637	1.13	0.97	1.33	0.13
FAM120B_rs9366198	G	527/1317	485/1425	1.17	1.01	1.34	0.03
FAM120B_rs9460106	C	853/997	806/1146	1.22	1.07	1.39	0.003
FAM120B_rs2103816	A	960/912	929/1047	1.19	1.05	1.35	0.008
FAM120B_rs9460139	T	106/1776	123/1843	0.89	0.68	1.17	0.41
FAM120B_rs9295407	T	96/1786	112/1872	0.90	0.68	1.19	0.45
PSMB1_rs6914744	C	756/1124	792/1192	1.01	0.89	1.15	0.85
TBP_rs6456230	T	766/1110	799/1181	1.02	0.90	1.16	0.76
TBP_rs13207114	G	740/1112	758/1176	1.03	0.91	1.17	0.64