Table 6. Overview of genomic characteristics of Myoviridae that infect P. aeruginosa.
Genus | Phage | Isolated place | Accession | Genome size (bp) | Protein (n) | tRNAs (n) | % GC | Genome ends | Ref. |
phiKZ-like phages | phiKZ | Belgium | AF399011 | 280,334 | 306 | 6 | 36.8 | TR | [12] |
EL | Belgium | AJ697969 | 211,215 | 201 | 1 | 49.3 | TR | [66] | |
P2-like phages | phiCTX | Japan | AB008550 | 35,580 | 47 | – | 62.6 | 5′ cos | [13] |
PB1-like phages | PB1 | Scotland | EU716414 | 65,764 | 93 | – | 54.9 | NP | [14] |
SN | Russia | FM887021 | 66,390 | 92 | – | 55.6 | NP | [14] | |
14-1 | Germany | FM897211 | 66,235 | 90 | – | 55.6 | NP | [14] | |
LMA2 | Holland | FM201282 | 66,530 | 94 | – | 55.6 | NP | [14] | |
LBL3 | Spain | FM201281 | 64,427 | 88 | – | 55.5 | NP | [14] | |
F8 | Canada | DQ163917 | 66,015 | 91 | – | 54.9 | NP | [11] | |
JG024 | Germany | GU815091 | 66,275 | 94 | – | 55.6 | NP | [41] | |
NH-4 | Ireland | JN254800 | 66,116 | 94 | – | 55.5 | NP | [64] | |
KPP10-like phages | KPP10 | Japan | AB472900 | 88,322 | 146 | 3 | 54.8 | TR | [15] |
P3_CHA | France | HM173081 | 88,097 | 185 | 2 | 54.8 | NR | [54] | |
PAK_P3 | France | HM173082 | 88,097 | 185 | 2 | 54.8 | NR | [54] | |
Unclassified Myoviridae | PaP1 | China | HQ832595 | 91,715 | 157 | 12 | 49.4 | TR | PW |
PAK_P1 | France | GQ422154 | 93,398 | 158 | 12 | 49.5 | NR | [32] | |
JG004 | Germany | GU988610 | 93,017 | 161 | 12 | 49.3 | TR | [31] | |
Ab1# | Cote d'Ivoire | HE983845 | 92,777 | 158 | 11 | 49.3 | NR | – |
Data listed in the table are mainly obtained from the public genome sequences as of 28 Oct. 2012.
TR: Terminally redundant, NP: Non-permuted, cos: Cohesive ends, NR: Not reported, PW: Present work.
The full name is vB_PaeM_C2-10_Ab1.