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. 2013 May 14;8(5):e63948. doi: 10.1371/journal.pone.0063948

Table 4. Diversity indices calculated based on RFLP patterns.

Library N n Chao1 Coverage (%) Shannon
chibwantu1 48 4 4.5 (4.0–12.3) 96 0.39 (0.10–0.67)
chibwantu2 48 6 6.5 (6.0–14.3) 96 1.10 (0.81–1.38)
chibwantu8 46 13 13.6 (13.1–20.1) 93 2.20 (1.93–2.47)
mabisi1 49 6 6* 98 1.53 (1.35–1.70)
mabisi10 47 9 9.25 (9.0–13.8) 96 1.53 (1.20–1.86)
mabisi5 49 7 7* 98 1.36 (1.06–1.66)
munkoyo5 44 5 6 (5.1–18.5) 95 0.77 (0.44–1.09)
munkoyo9 50 3 3* 98 0.63 (0.44–0.83)

Numbers between brackets show 95% confidence intervals. N: number of patterns analysed; n: number of observed unique patterns; Chao: estimation of the total number of unique types in the population; * indicates that the rarefaction curve reached saturation; coverage: fraction that our sampling covers from total number of types; Shannon: Shannon diversity index.