Table 1. Sequence characterisation of HeV siRNAs and D-siRNAs targeting N, P and M genes.
Identifier | Sense 5′–3′ | Antisense 5′–3′ |
siN4 | CUGAAGACUGCACGUGAAAUU | UUUCACGUGCAGUCUUCAGUU |
siN5 | GGACUGAGGAUCACCGAUAUU | UAUCGGUGAUCCUCAGUCCUU |
siN6 | AGAGGGUCAAUCCAUUCUUUU | AAGAAUGGAUUGACCCUCUUU |
siN7 | GGTAAAGAAAGGCGGAUCAUU | UGAUCCGCCUUUCUUUACCUU |
siN8 | AGGAAAUUAUGUCGAGGAAUU | UUCCUCGACAUAAUUUCCUUU |
siN11 | ACAUCAUGCUGGCGGGAUUUU | AAUCCCGCCAGCAUGAUGUUU |
siN12 | CAUGCAGGCAAGAGAAGCCUU | GGCUUCUCUUGCCUGCAUGUU |
siN15 | GCACAGAGCUCAUCGGAAAUU | UUUCCGAUGAGCUCUGUGCUU |
siP2 | CAACCAAGUACCAAAGACAGGACaa | UUGUCCUGUCUUUGGUACUUGGUUGUU |
siP8 | GGAGUAUGAGGAUGAGUUUGCCAaa | UUUGGCAAACUCAUCCUCAUACUCCAG |
siP10 | AGAAGAAACUCCUGAUGUACGCAga | UCUGCGUACAUCAGGAGUUUCUUCUUU |
siP18 | AGGCAAGGGUGAAAGGAAAGGGAaa | UUUCCCUUUCCUUUCACCCUUGCCUUU |
siM2 | GCCAGAAAUUGAUAAGCAUGGCAgt | ACUGCCAUGCUUAUCAAUUUCUGGCUC |
siM5 | CUCUUACCAUGGAAGAAGAUUCUga | UCAGAAUCUUCUUCCAUGGUAAGAGAU |
siM7 | CGACAAAGACGGAACCAAAGUGGca | UGCCACUUUGGUUCCGUCUUUGUCGAA |
siM8 | AGAGAAAGAUUGACAGAAUGAAGct | AGCUUCAUUCUGUCAAUCUUUCUCUUG |
ScrM7 | CGUUAAUCGCGUAUAAUACGCGUat | AUACGCGUAUUAUACGCGAUUAACGAC |
Nucleocapsid siRNAs are conventional 21 bp siRNAs. All M, P and ScrM7 are D-siRNAs that are 25+27 bp long, with a two RNA nucleotide overhang only on the antisense strand and two DNA nucleotides on the sense strand depicted in lowercase letters.