Table 4.
Results on several widely used real data sets.
| Data (# of sequences) | (l, d) | K | q | Predicted motifs | Published motifs |
|---|---|---|---|---|---|
| DHFR (4) | (11, 3) | 2 | 0 | GCGCCAAACTT | ATTTCGCGCCA |
| c-fos (6) | (16, 4) | 5 | 0 | CCATTTTAGGACATCT | CCATATTAGGACATCT |
| preproinsulin (4) | (15, 4) | 5 | 0 | TGCAACCTCAGCCCC | CAGCCTCAGCCCCCA |
| metallothionein (4) | (15, 4) | 5 | 0 | CTCTGCACCCGGCCC | CTCTGCACRCCGCCC |
| Yeast ECB (5) | (16, 5) | 5 | 0 | TTACCCAGTAAGGAAA | TTTCCCNNTNAGGAAA |
| LexA (16) | (20, 7) | 7 | 2 | ATACTGTATATGCATTCAAC | TACTGTATATATATACAGTA |
| E.coli CRP (18) | (16, 7) | 5 | 2 | TGTGAACGAGTTCACA | TGTGANNNNGNTCACA |