Table 1.
Primers sequences for the β-thalassemia and HLA markers included in our method.
| Marker | Primer | Dye | Sequence | Size of fragment (bp) |
|---|---|---|---|---|
| HLA typing | ||||
| D6S1571 | D6S1571F | PET | GGACCTACGCATCTGGTG | 160–180 |
| D6S1571R | TGGCTCTAATGGTTACTTTTTACA | |||
| D6S1260 | D6S1260F | NED | ACTGCTCCTGGGCATGGTTG | 130–160 |
| D6S1260R | GTACATGCCTTTGTTAACATC | |||
| D6S1624 | D6S1624F | 6FAM | GGAAGTCTTCAGTGGAGAGAGT | 200–220 |
| D6S1624R | ACTCCAGGTGTTTGTGGTTT | |||
| MOG-CA | MGCAF | VIC | TCACCTCGAGTGAGTCTCTTT | 205–235 |
| MOGCAR | ACCATGGGTAACTGAAGCAT | |||
| MOG-TAAA | MOG3F | 6FAM | GAAATGTGAGAATAAAGGAGA | 125–150 |
| MOG3R | GATAAAGGGGAACTACTACA | |||
| D6S265 | D6S265F | 6FAM | ACGTTCGTACCCATTAACCT | 110–125 |
| D6S265R | CGAGGTAAACAGCAGAAAGA | |||
| HLAC-CA | HLACCAF | VIC | TCCCTAGTAGCTGGGATTACA | 155–175 |
| HLACCAR | CGGCAAGAGACTCTGATGA | |||
| MIB | MIBF | 6FAM | CCACAGTCTCTATCAGTCCAGA | 155–185 |
| MIBR | TCAGCCTGCTAGCTTATCCT | |||
| D6S273 | D6S273F | 6FAM | GGCCAAAGTTAAAACCAAAC | 135–145 |
| D6S273R | GCAACTTTTCTGTCAATCCA | |||
| DRA-CA | DRACAF | VIC | GATACTTTCCTAATTCTCCTCCTTC | 120–140 |
| DRACAR | ATGGAATCTCATCAAGGTCAG | |||
| D6S2443 | D6S2443F | 6FAM | CCATACCAAAGTAAAACCCAG | 150–200 |
| D6S2443R | GAGGATGAAGGGAAATTAGAG | |||
| DQCAR | DQCARF | PET | CTTGGCCAATCAGAATCTTT | 150–175 |
| DQCARR | CTGCATTTCTCTTCCTTATCAC | |||
| TAP1-CA | TAP1CAF | PET | GGACAATATTTTGCTCCTGA | 195–215 |
| TAP1CAR | TCATACATCTGCTTTGATCTCC | |||
| RING3-CA | RING3CAF | 6FAM | GGGCCGCAGTTTAAGTAAC | 125–135 |
| RING3CAR | TGTTAGGTCAGAACCACAGAA | |||
| D6S1560 | D6S1560F | 6FAM | CTCCAGTCCCCACTGC | 225–250 |
| D6S1560R | CCCAAGGCCACATAGC | |||
| D6S1583 | D6S1583F | VIC | GCCCCTAACCTGCTTCTACTGA | 150–200 |
| D6S1583R | GCAGATGGCCCCACTGAC | |||
| D6S1618 | D6S1618F | NED | GGCCTGAGCAGTGCAT | 130–170 |
| D6S1618R | TGATTCCTAATCTGCGGG | |||
| D6S1611 | D6S1611F | PET | GAGCAAGACTCCATCTCAAA | 225–250 |
| D6S1611R | ACCTAAGTTCTCTGAAGGGC | |||
| D6S1610 | D6S1610F | PET | CCTGGTGAGATAGATGCTTG | 100–140 |
| D6S1610R | ATTTCCAGCAGAGCCTTG | |||
| D6S1552 | D6S1552F | VIC | AGCCTGAACGACAGAACAAG | 160–200 |
| D6S1552R | CTGCTTAACTTAGATCTTTGGTAT | |||
| β-thalassemia locus | ||||
| D11S4181 | D11S4181F | 6FAM | AAGCTTCCTTCACATTCTTACAG | 200–225 |
| D11S4181R | GAACTGAGACCAAGAACATTATTCC | |||
| D11S2351 | D11S2351F | 6FAM | GGGCACCTGTAATCCCA | 150–180 |
| D11S2351R | AGGAGTCACTGGATCTACTC | |||
| D11S1871 | D11S1871F | PET | AAGAAGTTGCCCTGATGTCT | 160–200 |
| D11S1871R | TAAAAGGAGCTGAATGCACA | |||
| D11S4891 | D11S4891F | 6FAM | GGAAATGGACCTCTGTCTC | 75–100 |
| D11S4891R | CTTTTATTCCAGCCCCAC | |||
| D11S1760 | D11S1760F | PET | GATCTCAAGTGTTTCCCCAC | 75–100 |
| D11S1760R | AAACGATGTCTGTCCACTCA | |||
| D11S1338 | D11S1338F | 6FAM | GACGGTTTAACTGTATATCTAAGAC | 250–280 |
| D11S1338R | TAATGCTACTTATTTGGAGTGTG |