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Assembly quality statistics of the L. punctata transcriptome
| Items | Characteristics |
|---|---|
| PE read number |
118,754,706 |
| Contig number |
74,797 |
| Contig ≥2000 bp |
13,612 |
| Contig ≥1000 bp |
31,989 |
| Average length (bp) |
1,166 |
| Max length (bp) |
16,562 |
| N50 length (bp) |
1,928 |
| Coverage | 115.2 |
PE reads from three L. punctata samples were pooled together and assembled by using Trinty (v2012-06-08) [46]. Statistics were conducted by common perl scripts.
