Table 3.
Single-SNP analysis
|
Model |
Genotype |
Status = Case |
Status = Control |
OR (95% CI) |
p-value |
AIC |
BIC |
|---|---|---|---|---|---|---|---|
| (N, %) | (N, %) | ||||||
| Co-dominant |
T/T |
29 (40.3%) |
141 (47.3%) |
1.00 |
0.10 |
353.1 |
372.7 |
| |
C/T |
37 (51.4%) |
116 (38.9%) |
0.59 (0.34-1.03) |
|
|
|
| |
C/C |
6 (8.3%) |
41 (13.8%) |
1.23 (0.47-3.23) |
|
|
|
| Dominant |
T/T |
29 (40.3%) |
141 (47.3%) |
1.00 |
0.16 |
353.7 |
369.3 |
| |
C/T-C/C |
43 (59.7%) |
157 (52.7%) |
0.68 (0.40-1.17) |
|
|
|
| Recessive |
T/T-C/T |
66 (91.7%) |
257 (86.2%) |
1.00 |
0.29 |
354.5 |
370.2 |
| |
C/C |
6 (8.3%) |
41 (13.8%) |
1.61 (0.64-4.01) |
|
|
|
| Over-dominant |
T/T-C/C |
35 (48.6%) |
182 (61.1%) |
1.00 |
0.037* |
351.3 |
366.9 |
| |
C/T |
37 (51.4%) |
116 (38.9%) |
0.57 (0.33-0.97) |
|
|
|
| Log-additive | 0.90 (0.61-1.32) | 0.59 | 355.4 | 371.0 |
SNP: rs1800871 Percentage of typed sample: 370/374 (98.93%).
rs1800871 association with response status (n = 370, adjusted by sex + age).
* p < 0.05 indicates statistical significance.