Table 3.
General features of M.yannicii PS01 genome in comparison with M. testaceum StLB037 and M. laevaniformans OR221 genomes
| Species | Database accession number | Genome size (bp) | %GC content | No. of CDS | No. of RNA |
Alignment length (bp) |
Y∆= 0% |
Y∆> 80% |
|---|---|---|---|---|---|---|---|---|
| (cut-off E-value 1.00e-5)β | Id | Id | ||||||
|
M. yanniciiPS01 |
CAJF01000001- CAJF01000067 α |
3,952,501 |
69.54 |
3772 |
56 |
- |
- |
- |
|
M. testaceumStLB037 |
AP012052 |
3,982,034 |
70.28 |
3795 |
58 |
1,106,788 (28%) |
882 |
598 |
| M. laevaniformansOR221 | AJGR01000001- AJGR01000535 α | 3,427,400 | 68.03 | 3294 | 72 | 989,933 (25.05%) | 988 | 580 |
Table of comparison of M. yannicii PS01genome details in comparison with M. testaceum StLB037 and M. laevaniformans OR221 genomes.
α, genome sequences were deposited in Whole Genome Sequence (WGS), 67 contigs for M. yannicii and 535 contigs for M. laevaniformans;
β, the “In silico” DNA-DNA hybridization of M. yannicii PS01 genome against M. testaceum StLB037 and M. laevaniformans OR221 genomes, in parenthesis, the percentage of coverage with respect to M. yannicii genome; ∆, Number of M. yannicii proteins with any similarity and with similarity up to 80%.