Table 1. Summary of sequence read alignments to reference genome in testis samples.
Group | Sample | Total number of reads | Un-mapped reads | Mapped reads | Percentage of unmapped reads | Percentage of mapped reads |
Low androstenone | A1 | 15,142,756 | 7,811,096 | 7,331,660 | 51.50 | 48.50 |
A2 | 13,221,550 | 6,564,679 | 6,656,871 | 49.66 | 50.34 | |
A3 | 32,389,084 | 16,697,785 | 15,691,299 | 51.50 | 48.50 | |
A4 | 27,068,779 | 14,123,318 | 12,945,461 | 52.10 | 47.90 | |
A5 | 27,015,712 | 14,465,669 | 12,550,043 | 53.54 | 46.46 | |
High androstenone | A6 | 32,691,057 | 18,919,738 | 13,771,319 | 57.80 | 42.20 |
A7 | 33,206,723 | 17,271,473 | 15,935,250 | 51.20 | 48.80 | |
A8 | 15,111,453 | 7,764,418 | 7,347,035 | 51.38 | 48.62 | |
A9 | 14,330,069 | 8,070,092 | 6,259,977 | 56.31 | 43.69 | |
A10 | 15,605,400 | 8,276,052 | 7,329,348 | 53.30 | 46.70 |