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. Author manuscript; available in PMC: 2013 May 17.
Published in final edited form as: J Proteome Res. 2011 Dec 27;11(2):808–817. doi: 10.1021/pr2006704

Table 2.

Results of quantitative Chip/Chip/SRM measurements for PSA protein added to human female plasma (i) prior to immunodepletion of albumin and IgGa with LOQ indicated in bold; (ii) recovery of PSA after immunodepletion step only as determined by ELISA; and (iii) Chip/Chip/SRM measurements for PSA protein added to female plasma after immunodepletion with the LOQ specified in bold.

Target ng/mL

Protein Proteotypic
peptide
Q1 → Q3 Quantitative
measurements
0.25 0.50 1.0 2.5 5.0 25 50
(i) PSA added prior to immunodepletion/dPC

  PSA IVGGWECamcEK 539.7 → 866.3 Calculated ng/mL NSD 0.10 0.29 1.1 2.6 19 35
% CV NSD 137 13 18 12 8.2 10
% Recoveryb NSD 20 29 42 53 76 70
  PSA LSEPAELTDAVK 636.8 → 943.5 Calculated ng/mL NSD 0.13 0.36 1.2 2.7 15 32
% CV NSD 132 19 14 18 11 12
% Recoveryb NSD 20 36 47 55 60 64

(ii) PSA after immunodepletion (without dPC), % recovery measured by ELISA (n = 2)

Total PSA measured N/A N/A N/A 41 65 71 65

(iii) PSA added after immunodepletion/dPC

  PSA IVGGWECamcEK 539.7 → 866.3 Calculated ng/mL 0.11 0.21 1.0 2.8 4.1 N/A N/A
% CV 122 2.8 10.0 9.9 9.6
% Recoveryb 44 41 101 110 81
  PSA LSEPAELTDAVK 636.8 → 943.5 Calculated ng/mL 0.20 0.24 1.0 2.6 4.1 N/A N/A
% CV 115 22 16 13 11
% Recoveryb 80 48 98 103 82
a

Sample Preparations and SRM experiments were performed in duplicate for a total of four replicates (n = 4).

b

% Recovery = (calculated (ng/mL)/target (ng/mL) × 100.

N/A = sample were not investigated.

NSD = no single detected.