Table 3. Summary sequence statistics for the 11 loci within the populations SE-61, SE-64, and FI-67.
| Resampling |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Gene | Pop | N | Bp | S | Hd | θw | π | Tajd | Mean π (min, max) | Mean TajD (min, max) |
| PaAP2L3 | SE-61 | 16 | 519 | 5 (2) | 0.69 | 2.9 | 2.4 | −0.53 | 1.2 (0.5, 1.6) | −0.28 (−1.0, 0.3) |
| SE-64 | 7 | 544 | 4 (0) | 0.67 | 3 | 3.9 | −1.35 | n.a. | n.a. | |
| FI-67 | 16 | 811 | 7 (0) | 0.77 | 2.6 | 3.3 | 0.99 | 2.5 (1.4, 3.1) | 0.57 (−0.7, 1.4) | |
| PaCDF1 | SE-61 | 20 | 1179 | 15 (7) | 0.94 | 3.6 | 2.6 | −1.03 | 2.0 (1.3, 2.8) | −0.51 (−1.3, 0.5) |
| SE-64 | 18 | 1506 | 11 (2) | 0.84 | 2.1 | 2.4 | 0.47 | 2.2 (1.4, 2.7) | 0.13 (−0.5, 1.2) | |
| FI-67 | 16 | 1330 | 14 (6) | 0.94 | 3.2 | 2.6 | −0.76 | 1.5 (0.8, 2.3) | −0.93 (−1.6, −0.6) | |
| PaCOL1 | SE-61 | 20 | 2495 | 40 (15) | 0.97 | 4.5 | 3.3 | −1.11 | 3.2 (2.9, 3.5) | −0.96 (−1.4, −0.3) |
| SE-64 | 14 | 2527 | 30 (15) | 0.96 | 3.7 | 3.3 | −0.54 | 3.2 (2.5, 4.1) | −0.22 (−0.7, 0.3) | |
| FI-67 | 11 | 2492 | 23 (4) | 0.93 | 3.2 | 3.5 | 0.51 | 3.5 (3.1, 3.8) | 0.42 (−0.3, 1.5) | |
| PaMFT1 | SE-61 | 21 | 1670 | 27 (15) | 0.96 | 4.5 | 3.6 | −0.82 | 3.1 (1.8, 3.9) | −0.18 (−0.8, 0.4) |
| SE-64 | 14 | 1674 | 23 (13) | 0.99 | 4.3 | 3.9 | −0.4 | 3.2 (2.7, 3.6) | 0.09 (−0.4, 1.0) | |
| FI-67 | 14 | 1676 | 15 (7) | 0.93 | 2.8 | 2.8 | −0.1 | 2.7 (1.9, 6.2) | 0.23 (−0.4, 1.5) | |
| PaFTL1 | SE-61 | 20 | 784 | 8 (1) | 0.77 | 2.9 | 2.7 | −0.18 | 1.6 (1.2, 2.0) | −0.2 (−1.0, 0.5) |
| SE-64 | 19 | 865 | 11 (4) | 0.89 | 3.6 | 3 | −0.62 | 1.7 (1.0, 2.6) | −0.49 (−1.3, 0.7) | |
| FI-67 | 17 | 1206 | 14 (6) | 0.82 | 3.4 | 3 | −0.52 | 2.3 (1.1, 3.8) | −0.38 (−0.9, 0.5) | |
| PaCCA1 | SE-61 | 20 | 992 | 16 (6) | 0.89 | 4.6 | 3 | −1.23 | 2.1 (1.3, 2.9) | −0.85 (−1.3, 0.2) |
| SE-64 | 15 | 900 | 14 (5) | 0.93 | 4.8 | 3.7 | −0.94 | 2.1 1.3, 2.7) | −1.01 (−1.5, 0.2) | |
| FI-67 | 15 | 896 | 17 (11) | 0.93 | 5.8 | 3.4 | −1.69 | 1.8 (1.1, 2.8) | −1.29 (−1.8, −0.4) | |
| PaPRR7 | SE-61 | 18 | 2477 | 18 (9) | 0.95 | 2.1 | 1.6 | −0.95 | 1.2 (0.9, 1.7) | −0.45 (−1.4, 0.2) |
| SE-64 | 19 | 2513 | 15 (8) | 0.9 | 1.7 | 1.2 | −1.06 | 1.5 (0.6, 1.8) | 0.00 (−0.8, 0.4) | |
| FI-67 | 18 | 3178 | 24 (13) | 0.94 | 2.2 | 1.6 | −1.07 | 1.2 (1.0, 1.4) | −0.63 (−1.0, −0.2) | |
| PaPRR1 | SE-61 | 22 | 1068 | 21 (10) | 0.94 | 5.4 | 4.6 | −0.53 | 4.1 (2.4, 5.4) | 0.22 (−0.3, 1.1) |
| SE-64 | 18 | 1054 | 18 (7) | 0.86 | 5 | 5.6 | 0.49 | 4.0 (2.1, 5.8) | −0.01 (−1.1, 0.9) | |
| FI-67 | 21 | 1035 | 16 (4) | 0.89 | 4.3 | 5 | 0.61 | 3.6 (2.7, 4.8) | 0.61 (−0.1, 1.5) | |
| PaWS02746 | SE-61 | 18 | 515 | 26 (12) | 0.98 | 15 | 14 | −0.23 | 3.8 (2.8, 6.5) | −0.33 (−0.8, 0.6) |
| SE-64 | 15 | 513 | 19 (7) | 0.97 | 11 | 12 | 0.14 | 4.3 (3.1, 5.9) | 0.47 (−1.1, 1.5) | |
| FI-67 | 15 | 959 | 29 (12) | 0.99 | 9.3 | 10 | 0.37 | 7.4 (6.3, 9.3) | 0.37 (−1.0, 1.0) | |
| PaWS02749 | SE-61 | 19 | 641 | 28 (14) | 0.73 | 13 | 8.3 | −1.31 | 4.4 (1.8, 6.4) | −1.04 (−1.8, −0.5) |
| SE-64 | 14 | 735 | 28 (13) | 0.92 | 12 | 9.9 | −0.75 | 5.1 (3.0, 8.6) | −0.58 (−1.5, 0.5) | |
| FI-67 | 16 | 847 | 28 (17) | 0.87 | 10 | 8.3 | −0.69 | 5.2 (4.5, 6.3) | −0.30 (−0.8, 0.2) | |
| PaZIP | SE-61 | 22 | 1123 | 14 (3) | 0.68 | 3.4 | 3.6 | 0.17 | 2.6 (1.4, 4.5) | −0.53 (−1.8, 1.2) |
| SE-64 | 22 | 932 | 14 (5) | 0.8 | 4.1 | 3.3 | −0.68 | 2.3 (1.5, 3.2) | −0.57 (−1.7, 1.4) | |
| FI-67 | 16 | 900 | 21(12) | 0.78 | 4 | 5.2 | 1.12 | 3.1 (2.6, 3.9) | 1.09 (−0.3, 2.0) | |
N, sample size; S, number of segregating sites; Hd, observed haplotype diversity; θw, Wattersons estimate of θ (×10-03); π, average pairwise distance (×10-03); TajD, Tajima’s D; n.a., not calculated due to low sample size.