Table 3.
Outlier analysis for divergent selection between fiber and linseed types
| Outlier analysis | Highest LD1 | |||||||
|---|---|---|---|---|---|---|---|---|
|
Locus |
Linkage group |
Ewens-Watterson |
Ln RH |
LOSITAN |
Hierarchical |
Fiber |
Oil |
FST |
| c206-s208_Lu128 |
2 |
n.s. |
n.s. |
*** |
** |
0.03 (6.2) |
0.03 (6.2) |
0.43 |
| c475-s917_Lu2021a |
2 |
* |
** |
*** |
n.s. |
0.01 (1.5) |
0.03 (8.3) |
0.04 |
| c16-s156_Lu373 |
3 |
** |
* |
n.s. |
n.s. |
0.10 (1.9) |
0.22 (1.9) |
0.16 |
| c36-s291_Lu176 |
5 |
** |
n.s. |
n.s. |
* |
0.02 (3.3) |
0.06 (3.3) |
0.27 |
| c108-s305_Lu595 |
8 |
** |
** |
*** |
n.s. |
0.00 (0.0) |
0.00 (0.0) |
0.10 |
| c441-s225_Lu3189 |
8 |
* |
n.s. |
n.s. |
* |
0.05 (2.7) |
0.31 (2.7) |
0.32 |
| c175-s86_Lu2824 |
9 |
* |
** |
*** |
n.s. |
0.01 (4.1) |
0.02 (6.9) |
0.02 |
| c306-s98_Lu765Bb |
12 |
** |
** |
*** |
n.s. |
0.09 (1.3) |
1.00 (1.3) |
0.07 |
| c226-s280_Lu637 | 15 | ** | * | *** | n.s. | 0.02 (3.7) | 0.13 (3.7) | 0.01 |
* P < 0.05, ** P < 0.01, *** false discovery rate (FDR) < 0.05, n.s. not statistically significant.
1 Highest LD between the candidate locus and one of the two adjacent loci. The genetic distance (cM) at which the highest LD extent was observed is indicated in brackets.