Figure 5.
The left panel shows the frequency of each effect estimated with p-value smaller than 0.05 over 1000 replicates with the two prior distributions, hierarchical Cauchy (HC) and hierarchical double exponential (HDE). The right panel shows the assumed values (circles), the estimated means (points) and the 95% intervals (short lines). Only effects with non-zero simulated value are labeled and blacked. The notation, e.g., c5.25.5a, indicates the additive predictor of the marker located at 25.5 cM on chromosome 5.