Table 1.
SNP | Position (bp) | Nearest Gene | Health ABC | β* | Health ABC | AGES-Reykjavik | |||
---|---|---|---|---|---|---|---|---|---|
Al 1 | Al 2 | MAF | R 2 | MAF | R 2 | ||||
European ancestry | |||||||||
rs1558902 | 52,361,075 | FTO | A | T | 0.39 | 0.4268 | 0.9990 | 0.4069 | 0.9103 |
rs2867125 | 604,210 | TMEM18 | C | T | 0.31 | 0.1795 | 0.9999 | 0.1613 | 0.9997 |
rs571312 | 55,980,115 | MC4R | A | C | 0.23 | 0.2282 | 0.9997 | 0.2578 | 0.9644 |
rs10938397 | 44,877,284 | GNPDA2 | A | G | −0.18 | 0.4387 | 0.9959 | 0.4008 | 0.871 |
rs10767664 | 27,682,562 | BDNF | A | T | 0.19 | 0.2147 | 0.9983 | 0.1842 | 0.9993 |
rs2815752 | 72,585,028 | NEGR1 | A | G | 0.13 | 0.3575 | 1.0000 | 0.4185 | 1.0000 |
rs7359397 | 28,790,742 | SH2B1 | C | T | −0.15 | 0.3722 | 1.0000 | 0.4299 | 0.9996 |
rs12444979 | 19,841,101 | GPRC5B | C | T | 0.17 | 0.1504 | 0.9947 | 0.104 | 0.9975 |
rs2241423 | 65,873,892 | MAP2K5 | A | G | −0.13 | 0.2477 | 1.0000 | 0.204 | 0.9988 |
rs543874 | 176,156,103 | SEC16B | A | G | −0.22 | 0.1643 | 0.9995 | 0.2083 | 0.9897 |
African American | |||||||||
rs1558902 | 52,361,075 | FTO | T | A | −0.39 | 0.102 | 0.8767 | ||
rs2867125 | 604,210 | TMEM18 | T | C | −0.31 | 0.1165 | 0.9972 | ||
rs571312 | 55,980,115 | MC4R | A | C | 0.23 | 0.3546 | 0.9980 | ||
rs10938397 | 44,877,284 | GNPDA2 | G | A | 0.18 | 0.2318 | 0.9940 | ||
rs10767664 | 27,682,562 | BDNF | A | T | 0.19 | 0.0716 | 0.9996 | ||
rs2815752 | 72,585,028 | NEGR1 | A | G | 0.13 | 0.4381 | 1.0000 | ||
rs543874 | 176,156,103 | SEC16B | A | G | −0.22 | 0.249 | 0.9995 |
Note. MAF, minor allele frequency; R2, imputation quality from MACH.
*Per allele change in kilogram per meter squared from Speliotes and coworkers (4).