Table 3.
Number of SNPs and distribution of differentiation indices (DI) as a function of minimum number of reads from each subspecies pool
| Min reads/pool | Number of SNPs | Mean DI | Highly differentiated SNPs |
|---|---|---|---|
| 8 |
84,847 |
0.17 |
55 |
| 9 |
77,656 |
0.16 |
41 |
| 10 |
71,451 |
0.15 |
25 |
| 11 |
65,811 |
0.15 |
18 |
| 12 |
60,771 |
0.14 |
15 |
| 13 |
56,303 |
0.14 |
11 |
| 14 |
52,065 |
0.13 |
8 |
| 15 |
48,421 |
0.13 |
6 |
| 16 |
45,137 |
0.13 |
5 |
| 17 |
42,001 |
0.12 |
4 |
| 18 |
39,126 |
0.12 |
4 |
| 19 |
36,333 |
0.12 |
3 |
| 20 |
33,772 |
0.12 |
3 |
| 21 |
31,402 |
0.11 |
3 |
| 22 |
29,226 |
0.11 |
3 |
| 23 |
27,164 |
0.11 |
2 |
| 24 |
25,092 |
0.11 |
2 |
| 25 |
23,301 |
0.11 |
2 |
| 26 |
21,663 |
0.11 |
1 |
| 27 |
20,120 |
0.11 |
1 |
| 28 |
18,877 |
0.11 |
1 |
| 29 |
17,689 |
0.11 |
1 |
| 30 | 16,723 | 0.10 | 1 |