Table 4 . Posterior probabilities of true genotypes g_iℓ at a single locus ℓ of an individual i.

Observed genotype	True genotype	Posterior probability
wiℓ	giℓ	ℙ(giℓ|wiℓ, Ψ)
AℓkAℓh	AℓkAℓh	1
	Others	0
AℓkAℓk	AℓkAℓh	$\frac{2\left(1-\rho \right){\phi }_{\ell h}{\gamma }_{i\ell }}{\rho \left(1+{\gamma }_{i\ell }\right)+\left(1-\rho \right)\left(2{\gamma }_{i\ell }-{\phi }_{\ell k}{\gamma }_{i\ell }+{\phi }_{\ell k}\right)}$
	AℓkAℓk	$\frac{\left[\rho +\left(1-\rho \right){\phi }_{\ell k}\right]\left(1+{\gamma }_{i\ell }\right)}{\rho \left(1+{\gamma }_{i\ell }\right)+\left(1-\rho \right)\left(2{\gamma }_{i\ell }-{\phi }_{\ell k}{\gamma }_{i\ell }+{\phi }_{\ell k}\right)}$
XX	AℓkAℓh	2(1 − ρ)φℓkφℓh
	AℓkAℓk	$\rho {\phi }_{\ell k}+\left(1-\rho \right){\phi }_{\ell k}^2$

The calculation of ℙ(g_iℓ | w_iℓ, Ψ) is based on Equation 10. h ≠ k.