Table 6 . Posterior probabilities of the number of dropouts diℓ at a single locus ℓ of an individual i.
Observed genotype | No. dropouts | Joint probability | Posterior probability |
---|---|---|---|
wiℓ | diℓ | ℙ(diℓ, wiℓ|Ψ) | ℙ(diℓ|wiℓ, Ψ) |
AℓkAℓh | 0 | 2(1 − ρ)φℓkφℓh(1 − γiℓ)2 | 1 |
1 | 0 | 0 | |
2 | 0 | 0 | |
AℓkAℓk | 0 | [ρ + (1 − ρ)φℓk]φℓk(1 − γiℓ)2 | |
1 | 2φℓkγiℓ(1 − γiℓ) | ||
2 | 0 | 0 | |
XX | 0 | 0 | 0 |
1 | 0 | 0 | |
2 | 1 |
The calculations are based on Equations 12 and 13. h ≠ k.