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. 2012 Oct;192(2):651–669. doi: 10.1534/genetics.112.139519

Table 6 . Posterior probabilities of the number of dropouts di at a single locus ℓ of an individual i.

Observed genotype No. dropouts Joint probability Posterior probability
wi di ℙ(di, wi|Ψ) ℙ(di|wi, Ψ)
AkAh 0 2(1 − ρ)φkφh(1 − γi)2 1
1 0 0
2 0 0
AkAk 0 [ρ + (1 − ρ)φk]φk(1 − γi)2 [ρ+(1ρ)φk](1γi)ρ(1+γi)+(1ρ)(2γiφkγi+φk)
1 2φkγi(1 − γi) 2γiρ(1+γi)+(1ρ)(2γiφkγi+φk)
2 0 0
XX 0 0 0
1 0 0
2 γi2 1

The calculations are based on Equations 12 and 13. hk.

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