Figure 4.
Three protein system with A (blue), D (yellow), and E (green) located as in the crystal structure. The coloring scheme is the same as in Figure 3. (a) The initial structure with no contacts between proteins. (b) The three protein system after 40 ns of the trajectory. (c) The system after the 100 ns of trajectory. The lower inset shows interactions between proteins D and E, while the upper one shows interactions between protein A adsorbed to the surface and the surface atoms. (d) The A, D, E system after a 200 ns trajectory. The inset shows the DE dimer interface.