Table 2. Amino acid similarities and identities between the different members of the PvMSP3 family.
% | PvMSP3.1 (γ) | PvMSP3.2 | PvMSP3.3 (β) | PvMSP3.4 | PvMSP3.5 | PvMSP3.6 | PvMSP3.7 | PvMSP3.8 | PvMSP3.9 | PvMSP3.10 (α) | PvMSP3.11 |
PvMSP3.1 (γ) | 41 | 31.6 | 34 | 31.8 | 35.5 | 29.9 | 36.7 | 29.4 | 34.8 | 19.2 | |
PvMSP3.2 | 56.8 | 31.4 | 32.7 | 31.8 | 37.6 | 28.5 | 36.8 | 27.8 | 33.3 | 18.5 | |
PvMSP3.3 (β) | 47.9 | 48.5 | 34.1 | 34.1 | 31.8 | 34 | 32.5 | 31.2 | 32 | 18.2 | |
PvMSP3.4 | 45.4 | 46.7 | 52.3 | 72.6 | 33 | 44.8 | 33.5 | 41.8 | 29.9 | 16.6 | |
PvMSP3.5 | 45.1 | 46.4 | 51.5 | 83.4 | 33.4 | 47 | 32.8 | 42.9 | 29.6 | 16.1 | |
PvMSP3.6 | 54.5 | 55.3 | 50 | 47.9 | 48 | 29.5 | 81.8 | 29.3 | 40.1 | 19.2 | |
PvMSP3.7 | 42.7 | 44 | 49.6 | 61.2 | 63.8 | 44.4 | 30 | 63.2 | 29.9 | 16.4 | |
PvMSP3.8 | 55.9 | 55.5 | 50.5 | 49.4 | 48.1 | 87.8 | 45.7 | 29.2 | 39.9 | 20.5 | |
PvMSP3.9 | 41.5 | 42.2 | 48.3 | 57.7 | 59 | 43.1 | 74.8 | 43.4 | 27.5 | 14.6 | |
PvMSP3.10 (α) | 54 | 51.2 | 47.6 | 43.7 | 43.3 | 59.4 | 43.2 | 58.2 | 40.8 | 19 | |
PvMSP3.11 | 27.6 | 27.2 | 25.3 | 23 | 23.3 | 27.6 | 23.1 | 27.9 | 20.8 | 27.7 |
Similarities (italics) and identities (bolded) were generated with the MatGAT 2.0 program (http://www.bitincka.com/ledion/matgat/) and the BLOSUM50 scoring matrix.