Table 1.
Identified peptides containing over 50% of known functional peptide sequences. The overlap between breast milk peptides and the literature peptide is indicated in bolded amino acids. An amino acid mismatch between the literature peptide and our set of peptides is indicated by a red amino acid. Insertion of an amino acid is indicated in green.
| Identified peptides | Found peptide protein of origin | Overlapping literature functional peptide | Known activity | Known functional peptide origin | Ref |
|---|---|---|---|---|---|
| FDPQIPKLTDLE | human β-CN | QPTIPFFDPQIPK | Immunomodulating | human β-CN (105-117) | 58 |
| GRVMPVLKSPTIPFFDP | |||||
| GRVMPVLKSPTIPFFDPQIP | |||||
| GRVMPVLKSPTIPFFDPQIPK | |||||
| GRVMPVLKSPTIPFFDPQIPKLTD | |||||
| GRVMPVLKSPTIPFFDPQIPKLTDLEN | |||||
| MPVLKSPTIPFFDPQIP | |||||
| MPVLKSPTIPFFDPQIPK | |||||
| MPVLKSPTIPFFDPQIPKLTDLEN | |||||
| PTIPFFDPQIPK | |||||
| PTIPFFDPQIPKL | |||||
| PTIPFFDPQIPKLTD | |||||
| PVLKSPTIPFFDPQIPK | |||||
| SPTIPFFDPQIPK | |||||
| SPTIPFFDPQIPKLT | |||||
| VMPVLKSPTIPFFDPQIPK | |||||
| VMPVLKSPTIPFFDPQIPKLTD | |||||
| VMPVLKSPTIPFFDPQIPKLTDLEN | |||||
| AVPVQALLLNQELLLNPTHQIYPVTQPLAPVHNPISV | human β-CN | QELLLNPTHQYPVTQPLAPVHNPISV | Antibacterial | human β-CN (184-210) | 59 |
| ELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| ELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| HQIYPVTQPLAPVHNPISV | |||||
| LLLNPTHQIYPVTQPLAPVHNPIS | |||||
| LLLNPTHQIYPVTQPLAPVHNPISV | |||||
| LLLNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| LLLNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| LLNPTHQIYPVTQPLAPVHNPIS | |||||
| LLNPTHQIYPVTQPLAPVHNPISV | |||||
| LLNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| LLNQELLLNPTHQ | |||||
| LLNQELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| LNPTHQIYPVTQPLAPVHNPIS | |||||
| LNPTHQIYPVTQPLAPVHNPISV | |||||
| LNQELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| LNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| NPTHQIYPVTQPLAPVHNPIS | |||||
| NPTHQIYPVTQPLAPVHNPISV | |||||
| NQELLLNPTHQIYPVT | |||||
| NQELLLNPTHQIYPVTQPLAPVH | |||||
| NQELLLNPTHQIYPVTQPLAPVHNP | |||||
| NQELLLNPTHQIYPVTQPLAPVHNPI | |||||
| NQELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| NQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| PTHQIYPVTQPLAPVHNPISV | |||||
| PVTQPLAPVHNPISV | |||||
| QELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| QELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| QIYPVTQPLAPVHNPISV | |||||
| QPLAPVHNPISV | |||||
| THQIYPVTQPLAPVHNPISV | |||||
| TQPLAPVHNPISV | |||||
| VLPIPQQVVPYPQRAVPVQALLLNQELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| VLPIPQQVVPYPQRAVPVQALLLNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| VPVQALLLNQELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| VPVQALLLNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| VQALLLNQELLLNPTHQIYPVTQPLAPVHNPIS | |||||
| VQALLLNQELLLNPTHQIYPVTQPLAPVHNPISV | |||||
| VTQPLAPVHNPISV | |||||
| YPVTQPLAPVHNPISV |