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. 2013 May 2;69(Pt 6):946–959. doi: 10.1107/S0907444913003454

Table 2. Crystallographic techniques that acquire or model dynamic structural information.

Technique Information Drawbacks
Atomic displacement parameters Thermal vibration Little relevance to function (Lu et al., 2005)
Alternative conformations Coexisting conformations Static
Ensemble refinement (Gros et al., 1990; Levin et al., 2007) Conformational polymorphism (Lang et al., 2010) More parameters and data limitation (Terwilliger et al., 2007)
Structural comparison Structural differences Stable structures only
Chemical trapping Intermediate, especially after rate-limiting step Difficulty in design
Cryotrapping Intermediate structure May alter reaction pathway
Time-resolved crystallography Intermediate and reaction mechanism Difficulty in rapid reaction initiation

To capture an intermediate after a natural rate-limiting step that cannot accumulate to a sufficient concentration, chemical trapping is the only approach possible to slow down or to stall the next step so that the original step is no longer rate-limiting.