Table 1.

The five MAQC-II datasets, representing endpoints A through I that are available from the Gene Expression Omnibus

Dataset	Endpoint	Description	Platform
Hamner	A	Lung tumorigen vs. non-tumorigen	Affymetrix Mouse 430 2.0
Iconix	B	Non-genotoxic liver carcinogens vs. non-carcinogens	Amersham Uniset Rat 1 Bioarray
NIEHS	C	Liver toxicants vs. non-toxicants	Affymetrix Rat 230 2.0
Breast Cancer	D	Pre-operative treatment response	Affymetrix Human U133A
	E	Estrogen receptor status
Multiple Myeloma	F	Overall survival milestone outcome	Affymetrix Human U133 Plus 2.0
	G	Event-free survival milestone outcome
	H	Gender of patient (positive control)
	I	Random class labels (negative control)