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. 2013 Apr 11;288(21):14949–14958. doi: 10.1074/jbc.M113.454751

TABLE 1.

Crystal parameters, data collection, and structure refinement

Apo form Complex form
Data collection
    Space group C2 C2
    Unit cell
        a, b, c (Å) 183.28, 65.35, 126.69 184.03, 66.65, 133.35
        α, β, γ (degrees) 90.00, 133.38, 90.00 90.00, 136.33, 90.00
    Resolution range (Å) 42.9–2.0 46.0–2.4
    Unique reflections 72,464 (10,190)a 42,473 (5,887)
    Completeness (%) 98.8 (95.7) 98.2 (94.6)
    〈I/σ(I)〉 8.8 (4.5) 15.3 (6.5)
    Rmergeb (%) 8.3 (17.1) 5.1 (11.2)
    Average redundancy 3.4 (3.2) 3.5 (3.0)

Structure refinement
    Resolution range (Å) 31.7–2.0 46.0–2.4
    R factorc/R-freed (%) 17.7/22.2 17.5/25.1
    No. of protein atoms 7,504 7,522
    No. of water atoms 579 202
    RMSDe bond lengths (Å) 0.007 0.007
    RMSD bond angles (degrees) 1.159 1.143
    Mean B factors (Å2) 20.4 44.5
    Ramachandran plotf (residues, %)
        Most favored (%) 99.2 98.1
        Additional allowed (%) 0.8 1.9
        Outliers (%) 0 0
    Protein Data Bank entry 4IPL 4IPN

a The values in parentheses refer to statistics in the highest bin.

b Rmerge = ΣhklΣi|Ii(hkl) − 〈I(hkl)〉|/ΣhklΣiIi(hkl), where Ii(hkl) is the intensity of an observation, and 〈I(hkl)〉 is the mean value for its unique reflection. Summations are over all reflections.

c R factor = Σh|Fo(h) − Fc(h)|/ΣhFo(h), where Fo and Fc are the observed and calculated structure factor amplitudes, respectively.

d R-free was calculated with 5% of the data excluded from the refinement.

e Root mean square deviation from ideal values.

f Categories were defined by Molprobity.