Table 2.
Urate concentration–associated SNPs from secondary analyses
SNP | Chr. | bp (Build 36) | Gene | A1 | A2 | Freq. A1 | Serum urate (mg/dl)
|
Gout
|
|||
---|---|---|---|---|---|---|---|---|---|---|---|
Effect | s.e. | P value | OR | P value | |||||||
Urate transporter candidate analysis | |||||||||||
rs4149178a | 6 | 43380166 | SLC22A7 | A | G | 0.84 | −0.034 | 0.007 | 1.2 × 10−6 | 0.95 | 2.2 × 10−1 |
Functional association network analysis | |||||||||||
rs4970988a | 1 | 149216686 | ARNT | A | G | 0.36 | −0.028 | 0.005 | 1.0 × 10−7 | 0.96 | 2.1 × 10−1 |
rs7976059 | 12 | 50537539 | ACVR1B-ACVRL1 | T | G | 0.35 | 0.032 | 0.005 | 1.9 × 10−9 | 0.95 | 1.8 × 10−1 |
rs7953704 | 12 | 121191945 | B3GNT4 | A | G | 0.47 | −0.029 | 0.005 | 2.6 × 10−8 | 0.95 | 1.6 × 10−1 |
Allele frequencies are presented for the discovery sample. Chr., chromosome; A1, allele 1, effect allele; freq., frequency; s.e., standard error.
These SNPs met one but not both criteria required for replication.