Skip to main content
. Author manuscript; available in PMC: 2013 Aug 1.
Published in final edited form as: Nat Genet. 2013 Jan 6;45(2):208–213. doi: 10.1038/ng.2518

Figure 2.

Figure 2

Regional association plots of the signal at the MHC in the a) India discovery b) Brazil discovery c) Meta analysis of the discovery cohorts. The −log10 P values are shown on the upper part of each plot. SNPs are colored based on their r2 with the labeled hit SNP, calculated in the a) Indian controls b) Brazilian founders c) no r2 colouring. The SNP coloured in green is the hit SNP in the a) Brazil cohort b) India cohort c) India and Brazil cohorts. The bottom section of each plot shows the fine scale recombination rates estimated from individuals in the CEU HapMap population, and genes are marked as horizontal blue lines. Genes flanking the hit SNP are coloured red and are labeled.