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. Author manuscript; available in PMC: 2014 Aug 1.
Published in final edited form as: Int J Immunogenet. 2012 Nov 29;40(4):261–269. doi: 10.1111/iji.12021

Table 1.

DEFB1 SNP-allele frequencies in various groups of samples

Region SNP f (Allele) Group of samples
CFAR
MACS
Coriell
White(n = 37) Black (n = 65) (n = 39) NE (n = 10) AfSS (n = 9) Af-Am (n = 10) CHN (n = 10) MEX (n = 7)
Exon-1 -610G/A f (G) 0.69 0.77 0.74 0.75 0.78 0.75 0.45 0.57
f (A) 0.31 0.23 0.26 0.25 0.22 0.25 0.55 0.43
-390T/A f (T) 0.61 0.46 0.72 0.70 0.50 0.40 0.40 0.50
f (A) 0.39 0.54 0.28 0.30 0.50 0.60 0.60 0.50
-52G/A f (G) 0.61 0.47 0.72 0.70 0.50 0.40 0.40 0.50
f (A) 0.39 0.53 0.28 0.30 0.50 0.60 0.60 0.50
-44C/G f (C) 0.82 0.92 0.72 0.70 0.94 0.90 0.95 0.79
f (G) 0.18 0.08 0.28 0.30 0.06 0.10 0.05 0.21
-20G/A f (G) 0.58 0.65 0.54 0.60 0.61 0.70 0.65 0.71
f (A) 0.42 0.35 0.46 0.40 0.39 0.30 0.35 0.29
79T/A f (T) 0.81 0.88 0.74 0.70 0.89 0.90 0.95 0.79
f (A) 0.19 0.12 0.26 0.30 0.11 0.10 0.05 0.21
Exon-2 1654G>A f (G) 0.97 0.92 1.00 1.00 0.89 0.90 1.00 0.93
f (A) 0.03 0.08 0 0 0.11 0.10 0 0.07
1754G/A f (G) 0.89 0.95 0.85 0.80 0.94 0.95 0.70 0.93
f (A) 0.11 0.05 0.15 0.20 0.06 0.05 0.30 0.07
1836A/G f (A) 0.95 0.85 0.97 0.95 0.72 0.80 0.95 0.93
f (G) 0.05 0.15 0.03 0.05 0.28 0.20 0.05 0.07
1873T/C f (T) 0.97 0.96 1.00 1.00 1.00 0.90 1.00 1.00
f (C) 0.03 0.04 0 0 0 0.10 0 0

NE = Northern European, AfS S = African sub- Sahara, Af-Am = African-American, CHN = Chinese, MEX = Mexican.

CFAR patients of white and black races were self-identified.

MACS patients were white, non-Hispanic.