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. 2013 Apr 3;41(10):e109. doi: 10.1093/nar/gkt215

Figure 3.

Figure 3.

An illustrating example how Oases benefits from SEECER error correction. Top: Tophat read alignments in the EIF3CL gene for exons 9–13 before (first track) and after (second track) SEECER correction with human data. Colored dots highlight positions with deviations to the reference sequence in the gray read alignments. Bottom: Summary view of the whole region displaying the longest transfrag assembled. Oases assembled the transcript ENST00000380876 (EIF3CL) to 95% of its length with SEECER corrected data (red transfrag), whereas it was only assembled to 45% of its length when using the original data (blue transfrag).