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. 2013 May 28;8(5):e64736. doi: 10.1371/journal.pone.0064736

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© 2013 Futas, Horin

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

PMC Copyright notice

The evolutionary history was inferred using the neighbor-joining method [39]. The bootstrap consensus tree inferred from 1000 replicates [40] is taken to represent the evolutionary history of the taxa analyzed: Mus musculus (NP_032489.1, NP_032490.1, NP_444384.1, NP_034781.2, NP_034778.2, NP_032485.2, NP_444381.1, NP_001095090.1, NP_032487.2, NP_034780.1, NP_001239078.1, NP_038821.2, NP_444382.1, NP_444380.1, NP_034776.1, NP_077790.1, NP_444383.1, NP_001034207.1, NP_001239506.1, NP_573466.3, NP_038822.3, NP_032488.4); Rattus norvegicus (NP_001009718.1, NP_775413.1, NP_942041.1, NP_001009494.1, NP_001009919.1, NP_001009497.1, NP_001009498.1, NP_001104780.1, NP_001165559.1, NP_001009495.1, NP_001009499.1, NP_714948.1, NP_001012767.1, NP_001009487.1, NP_690061.1, NP_001009501.1, NP_001009486.1, NP_001009488.1); Cricetulus griseus (XP_003510604.1, XP_003509313.1); Bos taurus (NP_776801.1); Ovis aries (XP_004006913.1); Gorilla gorilla gorilla (XP_004052762.1); Papio hamadryas (AAK26161.1); Microcebus murinus (ACO83129.1, ACO83128.1); Tupaia chinensis (ELV12449.1); Sus scrofa (AAP13541.1); Halichoerus grypus (ACN78613.1, ACN78614.1); Mustela putorius furo (AES00881.1); Phoca vitulina vitulina (ACN78615.1, ACN78616.1); Leptonychotes weddellii (ACN78617.1); Zalophus californianus (ACN78618.1); Canis lupus familiaris (AAP13540.1); Felis catus (AAP13539.1); Equus caballus (NP_001075297.1, NP_001075298.1, NP_001075299.1, NP_001075392.1, NP_001075393.1, NP_001075998.1); Equus grevyi; Equus zebra hartmannae; Equus burchellii boehmi; Equus burchellii antiquorum; Equus burchellii chapmanni; Equus burchellii cunninghami; Equus asinus; Equus asinus somalicus; Equus kiang and Equus hemionus kulan. Bootstrap confidences over 50% are given as numbers. The evolutionary distances were computed using the p-distance method [41]. The analysis involved 184 amino acid sequences. All ambiguous positions were removed for each sequence pair. A total of 135 positions were included into the final dataset. Evolutionary analyses were conducted in MEGA5 [26].