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. Author manuscript; available in PMC: 2013 May 29.
Published in final edited form as: J Mol Biol. 2006 Apr 6;359(3):624–645. doi: 10.1016/j.jmb.2006.03.050

Table 1.

Summary of data collection and refinement statistics

Lattice F432 F432 F432 F432 F432 F432 P21212
BeF3(−/+) + + + +
pH 10.5 8.4 7.5 10.5 8.4 7.5 6.0
Data collection
 Wavelength (Å) 0.979 1.072 1.072 0.979 0.979 0.979 1.072
 Cell a= 198.7 197.8 197.9 198.8 198.3 197.1 54.2
 (Å) b= 198.7 197.8 197.9 198.8 198.3 197.1 54.2
  c= 198.7 197.8 197.9 198.8 198.3 197.1 54.2
  α=β=γ = 90° 90° 90° 90° 90° 90° 90°
 Resolutiona (Å) 2.0 2.0 2.0 2.1 2.2 2.0 2.0
Rsym b 0.058/ 0.068/ 0.071/ 0.100/ 0.097/ 0.078/ 0.052/
(0.236) (0.377) (0.261) (0.358) (0.331) (0.251) (0.080)
 Completeness (%) 99.9 / 99.9/ 96.9 / 99.9 / 99.7/ 97.1/ 99.4
(99.5) (100.0) (98.5) (98.7) (100.0) (97.0) (99.3)
 I/σI 34.9/ 35.7/ 35.5/ 21.3/ 22.8/ 22.0/ 38.6/
 (7.1) (7.0) (8.2) (6.3) (8.0) (6.6) (21.5)
Refinement
 Resolutiona (Å) 2.0 2.0 2.0 2.1 2.3 2.0 2.0
Rworking c 0.210 0.220 0.212 0.197 0.193 0.200 0.186
Rfree d 0.224 0.246 0.228 0.207 0.220 0.213 0.232
 No. of reflections 20,589 20,593 20,015 17,947 13,445 19,511 7,864
 No. of protein atoms 1058 1067 1090 1083 1090 1078 1097
 Small moleculese
  Mg2+ 1 1 1 1
  BeF3 1 1 1 1
  Water 81 53 89 80 87 86 90
  CAPS 2 2
  Tris 1 1
  Sulfate 1 1 1 1 1 1
  Glycerol 1 1
  Acetyl group 1
 r.m.s.d. values from ideality
  Bond lengths (Å) 0.010 0.013 0.011 0.011 0.013 0.011 0.008
  Bond angles (°) 1.250 1.281 1.220 1.184 1.217 1.409 1.116
 B-valuef2) 25.60 28.76 24.13 20.04 21.28 27.45 10.92

Values corresponding to highest resolution shells are shown in parentheses.

a

High resolution limits for data collection and refinement are indicated.

b

Rsym=ΣIobsIavgΣIavg, where Iobs = observed integrated intensity and Iavg = average integrated intensity from multiple measurements.

c

Rworking=ΣFobs(hkl)Fcalc(hkl)ΣFobs(hkl), where Fobs and Fcalc are the observed and calculated structure factor amplitudes for hkl indices, respectively.

d

Rfree is identical to Rworking but is calculated from 10% of the reflections set aside as a disjoint set prior to refinement.

e

Number of small molecules in each case are indicated.

f

Overall B-value includes all atoms in a given model.