Table 1.
T. vaginalis PCR primers and their sensitivitiesa
Gene targetb | Primer | Primer sequence | Size (bp) | Sensitivityc |
|
---|---|---|---|---|---|
PCR | Nested PCR | ||||
KENGOE (L23861) | TVK3F | 5′-ATT GTC GAA CAT TGG TCT TAC CCT C-3′ | 262 | 1 | 0.01 |
TVK7R | 5′-TCT GTG CCG TCT TCA AGT ATG C-3′ | ||||
TVC1F | 5′-TCA GTT CGC AAA GGC AGT CCT-3′ | 213 | 1 | ||
TVC2R | 5′-GTA CTT ACG CTT GGA GAG GAC ATG A-3′ | ||||
MURESU (X83109) | TVC3F | 5′-GAT GCC ATG AAC GGA AAT GTT-3′ | 299 | 1 | 0.01 |
TVC4R | 5′-TCT GGA GCA TAT TGG ATC CG-3′ | ||||
TVC11F | 5′-CGA ATG GRA TAA CGA ATG CGA C-3′ | 237 | 0.1 | ||
TVC12R | 5′-CAA CCT TTC TTG TCA GAC AAC TTG-3′ | ||||
PACES (M86482) | TVC5F | 5′-AAT TCC CGG ATA ATT GAA ACG GA-3′ | 190 | 0.1 | 0.01 |
TVC6R | 5′-GAT GTT GGG GAT GTT TTG TAT TCT G-3′ | ||||
TVC7F | 5′-GAT AAA GAA AAT GTG TTT AAG TTG ATG GA-3′ | 148 | 1 | ||
TVC8R | 5′-TTG TAT TCT GAC ACT GGT TCC AAT TT-3′ | ||||
PACES (M86482) | TVOP1F | 5′-GTG AAA ATC TCA TTG GGG TAT TAA CTT-3′ | 580 | 1 | 0.01 |
TVOP2R | 5′-GTT TTA TTT ATC ACT GGA AAA TAA CGC TT-3′ | ||||
TVC9F | 5′-AGA ATA CAA AAC ATC CCC AAC ATC TT-3′ | 358 | 1 | ||
TVC10R | 5′-CCC ATT CTT TTA GAC CCT TCA GAT T-3′ |
For each gene target, the top 2 primers are for 1st PCR and the bottom 2 primers for 2nd PCR.
The gene targets are labeled with the name of the first author in the published sequence (GenBank accession number).
T. vaginalis organisms per PCR.