Table 2.

Probe haplotypes^a

Sequence	Count	%	No. of differences	Predicted % bound at annealing temp
....................	2,121	97.5	0	100
.....T..............	14	0.64	1	94.4
..............G.....	6	028	1	81.4
.....R..............	6	0.28	1	87.9b
.....W..............	5	0.23	1	94.4c
..............C.....	5	0.23	1	94.5
.....G..............	4	0.18	1	87.9

^aVariability is represented relative to the reference sequence at each site; a period is shown where the test sequence matched the reference exactly. The top line represents the most commonly found variant. Each individual sequence variant that was represented at >0.1% frequency in the data set is shown along with its prevalence, the number of differences compared to the target sequence, and the predicted binding efficiency.

^bPercentage shown is for the G variant.

^cPercentage shown is for the T variant.