Table 2. Difference of amino acid in CTL-specific epitopes (HLA-B57, HLA-A*01) between RSV prototype (A2) and Taiwan RSV-A strains.
HLA-B*57 | HLA-A*01 | ||||||||||||||||||
Amino acid position | 106 | 107 | 108 | 109 | 110 | 111 | 112 | 113 | 114 | 109 | 110 | 111 | 112 | 113 | 114 | 115 | 116 | 117 | 118 |
Prototype A2 | R | A | R | R | E | L | P | R | F | R | E | L | P | R | F | M | N | Y | T |
RSV-A strains | |||||||||||||||||||
A97-53-2008 | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
A95-287-2006 | . | . | . | . | . | . | Q | . | . | . | . | . | Q | . | . | . | . | . | . |
A97-72-2008 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | R | . | . | . |
A91-342-2002 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | H | . |
A97-20-2008 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | K |
A89-48-2000 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | K |
A: Alanine, E: Glutamic acid, F: Phenylalanine, H: Histidine, K: Lysine, L: Leucine, M: Methionine, N: Asparagine, P: Proline, Q: Glutamine, R: Arginine, T: Threonine, Y:Tyrosine.
Prototype A2: accession number FJ614814.