Table 3. Difference of amino acid in CTL-specific epitopes (HLA-B57, HLA-A*01) between RSV prototype (B1) and Taiwan RSV-B strains.
HLA-B*57 | HLA-A*01 | ||||||||||||||||||
Amino acid position | 106 | 107 | 108 | 109 | 110 | 111 | 112 | 113 | 114 | 109 | 110 | 111 | 112 | 113 | 114 | 115 | 116 | 117 | 118 |
Prototype B1 | R | A | R | R | E | A | P | Q | Y | R | E | A | P | Q | Y | M | N | Y | T |
RSV-B strains | |||||||||||||||||||
B-96-28-2007 | . | . | . | . | . | . | S | . | . | . | . | . | S | . | . | . | . | . | . |
B-99-20-2010 | . | . | . | . | . | . | . | K | . | . | . | . | . | K | . | . | . | . | . |
B-99-05-2010 | . | . | . | . | . | . | . | . | H | . | . | . | . | . | H | . | . | H | . |
B-96-02-2007 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | . | . |
B-96-04-2007 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | H | . |
B-94-969-2005 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | H | . |
B-94-957-2005 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | H | . |
B-94-1090-2005 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | H | . |
B-93-176-2004 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | I |
A: Alanine, E: Glutamic acid, F: Phenylalanine, H: Histidine, I: Isoleucine, K: Lysine, L: Leucine, M: Methionine, N: Asparagine, P: Proline, Q: Glutamine, R: Arginine,
S: Serine, T: Threonine, Y:Tyrosine.
Prototype B1: accession number AF013254.