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. 2013 May 30;8(5):e64699. doi: 10.1371/journal.pone.0064699

Table 1. Strains, plasmids and primers used.

Strains Relevant phenotype or genotype Reference or Source
B. breve UCC2003 Infant isolate [37]
B. breve NCFB2258 Infant isolate NCFB
E. coli EC101 Cloning host, repA+, Kanr [59]
Plasmids
pMOD2 Source of tn5 terminal ends, AmpR Epicentre Biotechnology
pMOD2-TetW TetR derivative of pMOD2 This study
Primers Sequence
TetW-Fw 5′-CGCTAGTCTAGAGCTCATGTACGGTAAGGAAG-3′ This study
TetW-Rev 5′CGCTAGGCATGC AAAACCCTCGGTCGGTCTGACCGGGGGTTTTGATTACATTACCTTCTGAAACATATGGC-3′ This study
pMOD<MCS>Fw 5′-ATTCAGGCTGCGCAACTGT-3′ Epicentre Biotechnology
pMOD<MCS>Rev 5′-GTCAGTGAGCGAGGAAGCGGAAG-3′ Epicentre Biotechnology
i-PCR-Fw 5′-GCATACCGTACTGATCTG-3′ This study
i-PCR-Rev 5′-CAATCATACCGGCTTCC-3′ This study
pMOD-fw-seq 5′-GCCAACGACTACGCACTAGCC-3′ Epicentre Biotechnology
pMOD-rev-seq 5′-GAGCCAATATGCGAGAACACC-3′ Epicentre Biotechnology

Restriction sites are underlined and a rho-transcriptional terminator sequence is highlighted in bold. NCFB, National Collection of Food Bacteria.