Table II. Probe set-to-target gene annotations for gene types annotated in TAIR10.
Gene type designations are from TAIR. The column labeled No Probe Set gives the number of genes of various types that have no ATH1 probe set. The column labeled Multitarget Probe Set Only reports genes that are interrogated by one or more multitarget probe sets but have no corresponding unique probe set.
| Gene Type (as Annotated in TAIR10) | No Probe Set |
Multitarget Probe Set Only |
||
|---|---|---|---|---|
| Pollen RPM ≥ 5 | Seedling RPM ≥ 5 | Pollen RPM ≥ 5 | Seedling RPM ≥ 5 | |
| protein_coding | 451 | 1,110 | 239 | 766 |
| transposable_element_gene | 19 | 23 | 6 | 2 |
| pseudogene | 17 | 22 | 0 | 2 |
| other_rna | 55 | 145 | 1 | 0 |
| pre_trna | 1 | 1 | 0 | 0 |
| mirna | 2 | 3 | 0 | 0 |
| small_nucleolar_rna | 0 | 1 | 0 | 0 |
| ribosomal_rna | 3 | 3 | 0 | 0 |
| snRNA | 0 | 0 | 0 | 0 |
| Total | 548 | 1,308 | 246 | 770 |