Table I. QTLs for IBMP content in leaves of the F1 population CS × RGM1995-1.
QTL | LG/Chr | Peak LOD | Confidence Interval | Markers Flanking QTL | LOD Threshold P = 0.05 on the LG | P-Value Threshold at the LG Level | P-Value Threshold at the Whole-Genome Level | % Expl | Distance between Flanking Markers on Chr Sequence | Predicted Genes between Flanking Markers on Chr Sequence |
---|---|---|---|---|---|---|---|---|---|---|
cM | Mbp | |||||||||
QTLIBMP12 | 12 | 4.49 | 0–21 | VMC8G6-scu05 | 2.7 | 0.001 | 0.03 | 11.4 | 6.73 | 606 |
QTLIBMP3 | 3 | 4.66 | 0–15 | VMC2E7-UDV021 | 2.5 | 0.001 | 0.02 | 11 | 1.93 | 211 |
QTLIBMP5 | 5 | 4.33 | 43–60 | VMC9B5-VMC4C6 | 2.7 | 0.001 | 0.04 | 10.8 | 5.26 | 383 |
QTLIBMP9 | 9 | 3.37 | 53–74 | VMC4H6-VMC2E11 | 3.3 | 0.05 | 0.24 | 8.8 | 13.02 | 444 |
QTLIBMP18 | 18 | 3.32 | 76–91 | VMC6F11-VMC7F2 | 2.9 | 0.02 | 0.24 | 9.4 | 3.70 | 206 |