Table 3.
Summary of GO enriched clusters in groups of genes sorted by expression level in blastocysts
Cluster # |
Expression level |
||||
---|---|---|---|---|---|
High | Medium high | Medium | Medium low | Low | |
1 |
Ribosome |
Lumen |
Lumen |
Lumen |
DNA repair/Stress response |
2 |
Oxidative Phosphorylation |
Cytoskeleton |
Chromosome structure |
Zinc finger PHD |
Zinc/ion binding |
3 |
Ubiquitination |
Protein catabolism |
Protein complexes |
Transcriptional regulation |
Protein catabolism |
4 |
Spliceosome |
Chromosome structure |
Mitochondrial subunits |
Mitochondrial matrix |
Protein transport |
5 |
RNA binding |
Nucleic acid binding |
Nucleic acid binding/Phospho-rylation |
Ankyrin repeats |
tRNA aminoacylation |
6 |
Electron transport |
Ubiquitination |
Endoplasmic reticulum |
Protein/nucleotide interactions |
Zinc finger CH2 |
7 |
Protein localization |
Protein complex synthesis |
Cell cycle |
Microtubules |
Cell death |
8 |
Protein biosynthesis |
Cell cycle |
Cellular membranes |
Mitochondrial membranes |
DNA repair/Polymerase |
9 |
Ribosomal subunits |
Mitochondrial components |
Ankyrin repeats |
Phosphorylation |
Suppression of differentiation |
10 | Protein folding | RNA splicing | tRNA | Zinc finger CH2 | Nucleic acid binding |