TABLE 6.
PhaG homologs in various bacteria sorted according to their amino acid identity to PhaG from Pseudomonas putida KT2440a
| Organism | Protein size (amino acids) | % Identity (similarity)b | Special features | Reference |
|---|---|---|---|---|
| P. putida strain KT2440 | 295 | 100 | 256 | |
| P. stutzeri strain 1317 | 295 | 100 | 282 | |
| P. nitroreducens strain 0802 | 295 | 99 (99) | Cryptic but active | 282 |
| P. mendocina strain LZ | 293 | 99 (99) | Inactive | 275 |
| P. oleovorans | 295 | 95 (98) | Cryptic but active | 283 |
| Burkholderia caryophylli | 294 | 78 (87) | 282 | |
| Pseudomonas sp. 61-3 | 294 | 70 (82) | HxxxxAE motif | 284 |
| P. fluorescens strain BM07 | 294 | 69 (82) | HxxxxAE motif | 270 |
| P. aeruginosa | 300 | 59 (77) | 268 | |
| P. pseudoalcaligenes | 295 | 99 (99) | Uncharacterized | |
| Pseudomonas sp. TJI-51 | 295 | 92 (95) | Uncharacterized | |
| P. entomophila | 294 | 89 (95) | Uncharacterized | |
| Pseudomonas sp. M47T1 | 294 | 72 (84) | Uncharacterized | |
| P. chlororaphis | 294 | 71 (83) | Uncharacterized | |
| P. synxantha | 294 | 68 (83) | Uncharacterized | |
| Pseudomonas sp. Ag1 | 294 | 67 (81) | Uncharacterized | |
| Pseudomonas sp. PAMC 25886 | 294 | 66 (81) | Uncharacterized | |
| P. brassicacearum subsp. brassicacearum NFM421 | 294 | 68 (80) | Uncharacterized | |
| P. extremaustralis 14-3 | 294 | 68 (82) | Uncharacterized | |
| Pseudomonas sp. USM 4-55 | 295 | 57 (74) | Uncharacterized | |
| P. fulva | 292 | 54 (72) | Uncharacterized | |
| P. savastanoi | 287 | 52 (74) | Uncharacterized | |
| Various P. syringae pathovars | 293 | 66 (80) | Uncharacterized |
a
The first nine proteins have been described in the literature, whereas the remaining, uncharacterized ones have been found via BLAST searches. In case of multiple hits for proteins similar to PhaG in different strains of one species, the maximal amino acid identity to PhaGPp in this species is given.
b
Maximal percentage of identical or similar amino acids in comparison to the reference sequence of PhaGPp.