Table 1.
Selected GO‐BP categories with high precision values
| Category names | Size | Max‐prec‐40 |
|---|---|---|
| Detection of external stimulus GO 0009581 |
36 |
1.000 |
|
Detection of light stimulus GO 0009583 |
28 |
1.000 |
| Rhodopsin mediated phototransduction GO 0009586 |
14 |
1.000 |
| Detection of stimulus GO 0051606 |
38 |
0.964 |
|
Chitin metabolism GO 0006030 |
25 |
0.958 |
|
Regulation of mitosis GO 0007088 |
21 |
0.938 |
| Phototransduction GO 0007602 |
25 |
0.938 |
|
Fatty acid oxidation GO 0019395 |
20 |
0.929 |
|
Oxidative phosphorylation GO 0006119 |
68 |
0.919 |
| ATP synthesis coupled electron transport sensu Eukaryota GO 0042775 |
22 |
0.917 |
|
Cell matrix adhesion GO 0007160 |
25 |
0.909 |
| ATP synthesis coupled electron transport GO 0042773 |
22 |
0.906 |
|
Segment specification GO 0007379 |
21 |
0.900 |
|
Interphase of mitotic cell cycle GO 0051329 |
16 |
0.900 |
| Cell substrate adhesion GO 0031589 |
25 |
0.875 |
|
Homophilic cell adhesion GO 0007156 |
16 |
0.854 |
|
Regulation of exocytosis GO 0017157 |
20 |
0.850 |
| Aerobic respiration GO 0009060 |
31 |
0.845 |
| Response to light stimulus GO 0009416 |
33 |
0.839 |
|
Chromosome condensation GO 0030261 |
27 |
0.833 |
|
Sphingolipid metabolism GO 0006665 |
12 |
0.833 |
|
Neuromuscular junction development GO 0007528 |
19 |
0.833 |
|
Chromatin assembly GO 0031497 |
20 |
0.833 |
|
Nuclear import GO 0051170 |
33 |
0.817 |
| Glucosamine metabolism GO 0006041 |
27 |
0.813 |
| N acetylglucosamine metabolism GO 0006044 |
27 |
0.813 |
| SRP dependent cotranslational protein targeting to membrane GO 0006614 |
12 |
0.813 |
|
RNA transport GO 0050658 |
14 |
0.800 |
|
Membrane lipid biosynthesis GO 0046467 |
20 |
0.792 |
| DNA amplification GO 0006277 |
19 |
0.788 |
|
Chorion gene amplification GO 0007307 |
18 |
0.783 |
|
DNA dependent DNA replication GO 0006261 |
53 |
0.776 |
| response to radiation GO 0009314 |
37 |
0.774 |
|
Ribosome biogenesis GO 0007046 |
18 |
0.771 |
|
Regulation of DNA metabolism GO 0051052 |
13 |
0.771 |
|
Ventral cord development GO 0007419 |
14 |
0.767 |
| Protein targeting to membrane GO 0006612 |
12 |
0.750 |
|
Neuron recognition GO 0008038 |
12 |
0.750 |
| Protein targeting to ER GO 0045047 | 12 | 0.750 |
Each one of these 39 categories has a fold‐average precision‐at‐40 (i.e. that corresponds to recall value = 0.4) equal or larger than 0.75. The number of genes in the dataset annotated with a category is also shown. Bold fonts are used for the 24 GO‐BP categories that show minimal redundancy with genes found in other categories.