Table 2. Summary of sequencing results.
| samples | |||||
|---|---|---|---|---|---|
| |
adult (1, 3)a |
infantb(2) |
pig (1) |
pig (2) |
pig (3) |
| number of samples sequenced |
1 |
1 |
8 |
23 |
22 |
| number of pigs |
|
|
2 |
4 |
2 |
| sequences meeting quality criteria |
9713 |
9200 |
9814 (81.4)c |
9306 |
9581 (359) |
| unique sequences | 16.7% | 8.4% | 9.1% (1.2) | 5.8%(1.4) | 13.2% (0.9) |
a experiment number is indicated in parenthesis (see text); pooled adult fecal sample was used for experiment 1 and 3.
b mean of two replicates (two samples amplified and sequenced independently)
c standard deviation is shown in parenthesis