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. 2013 Apr 2;4(3):222–231. doi: 10.4161/gmic.24373

Table 1. Quantitative real time PCR primers for targeted mouse genes.

Target Gene Primer Sequence (5′-3′) Annealing Temp (°C) Reference
RPL-19
GCA TCC TCA TGG AGC ACA T
55.2
39
 
CTG GTC AGC CAG GAG CTT
57.3
 
mNod1
TCC CTT GCC TGT GAG CAG AAA GTA
60.1
our lab
 
GTG GGT ATG TGC CAT GCT TTG CTT
60.5
 
mNod2
CAC ACA TGG CCT TTG GTT TCC AGT
60.2
our lab
 
AAA GAG CTG CAG TTG AGG GAG GAA
60.4
 
mMuc2
TGC CCA GAG AGT TTG GAG AG
58.6
40
 
CCT CAC ATG TGG TCT GGT TG
55.8
 
RegIII-γ (anti-microbial)
GCT CCT ATT GCT ATG CCT TGT TTA G
55.8
41
 
CAT GGA GGA CAG GAA GGA AGC
57.6
 
Defcr-5 (α-defensin, cryptin)
AGG CTG ATC CTA TCC ACA AAA CAG
56.8
42
 
TGA AGA GCA GAC CCT TCT TGG C
53.9
 
mBD-3 (β-defensin)
CTC TTT GCA TTT CTC CTG GTG
53.9
43
 
GGG AGC ACT TGT TTG CAT TT
54.3
 
mBD-14 (β-defensin)
GTA TTC CTC ATC TTG TTC TTG G
51.0
44
 
AAG TAC AGC ACA CCG GCC AC
60.3
 
KC
TGG GAT TCA CCT CAA GAA CA
53.6
45
 
TTT CTG AAC CAA GGG GAG C
55.0
 
mIL-6
TCC AAT GCT CTC CTA ACA GAT AAG
54.0
39
 
CAA GAT GAA TTG GAT GGT CTT G
51.8
 
mIL-17A
GCT CCA GAA GGC CCT CAG A
59.2
39
 
CTT TCC CTC CGC ATT GAC A
55.2
 
mIL-22
TCC GAG GAG TCA GTG CTA AA
56.9
39
  AGA ACG TCT TCC AGG GTG AA 54.2