Table 4. Haplotype structure.

	0|1 Blocks	1|0 Blocks	1|1 Blocks	Mixed Blocks	SNP Poor Blocks	Genome Wide
Block #	8,027	8,800	10,723	10,186	13,930	51,666
SNP #	512,526	573,193	819,557	979,448	263,673	3,148,397
Total Length (bp)	379,895,027	427,998,919	629,719,719	577,878,545	1,133,640,956	3,149,133,166
Average Length (bp)	47,333	48,642	58,726	56,733	81,387	58,564
% Genome in Block	12.06%	13.59%	20.00%	18.35%	36.00%	100.00%
SNP Density (SNP/Kb)	1.39	1.38	1.34	2.15	0.36	1

0|1 Blocks = Blocks rich in heterozygous SNPs on the second allele.

1|0 Blocks = Blocks rich in heterozygous SNPs on the first allele.

1|1 Blocks = Blocks rich in homozygous SNPs.

Mixed Blocks = Blocks rich in heterozygous on either allele and rich in homozygous SNPs.

SNP Poor Blocks = Regions poor in SNPs.