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Phylogenetic summary of marker genes from metagenome sequences compared to 16S rRNA gene sequences. Phylogenetic marker genes in the metagenome sequences were (A) assigned and classified using AMPHORA, and compared to (B) 16S rRNA sequences from ribosomal panels (n ∼ 300 per site) classified at the phylum-level against the RDP at a confidence threshold of 80%.
