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. 2012 Jan 1;1(1):42–50. doi: 10.4161/worm.19046

Table 1. Published nematode genomes.

Species Systematic position (Blaxter Clade, Helder Clade*) Year Published Technology Genome Size (Mbp) Number of chromosomes or scaffolds in assembly Scaffold N50 (kbp)†,‡ AT content (%) Number of genes/ proteins
Caenorhabditis elegans
V, 9E
19982
Sanger
100
6 chromosomes
17,494
64.6
20,461 / 25,244
Caenorhabditis briggsae
V, 9E
20033
Sanger
108
6 chromosomes + 5 fragments
17,485
62.6
NA / 21,986
Brugia malayi
III, 8
200752
Sanger
96
27,210
38
69.4
18,348 / 21,332
Meloidogyne hapla
IV, 11
200824
Sanger
53
3,452
38
72.6
NA / 13,072
Meloidogyne incognita
IV, 11
200827
Sanger
82
9,538
13
68.6
NA / 21,232
Pristionchus pacificus
V, 9B
200853
Sanger
172
18,083
1,245
57.2
NA / 24,217
Caenorhabditis angaria
V, 9E
201033
Illumina
80
33,559
9
63.7
22,662 / 26,265
Trichinella spiralis
I, 2A
201136
Sanger
64
6,863
6,373
66.1
16,380 / 16,380
Bursaphelenchus xylophilus
IV, 10D
201137
Roche 454, Illumina
75
5,527
950
59.6
18,074 / 18,074
Ascaris suum III, 8 201125 Illumina 273 29,831 408 62 18,542 / 18,542
*

Nematoda systematic clades as defined by Blaxter et al.21 and Holterman et al.29

Nuclear genome only, not including mitochondria or endosymbionts, computed from WormBase release WS227 where available or from data URLs in Table 2.

Scaffold N50: Half the assembly is in scaffolds of this size or larger in the nuclear genome.