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. 2012 Jan 1;1(1):42–50. doi: 10.4161/worm.19046

Table 3. Current sequencing costs, throughput and read lengths.

Technology Read length (bases) Error model Recommended sequencing depth Cost per base (£/€/$) Cost per 100 Mb genome (£/€/$) Throughput (bases/ day/ instrument) Time per 100 Mb genome per instrument (days)
Sanger dideoxy
1000–1500
Gold standard, accurate base quality, typical error probability 0.0001
10 X
10−3
106
106
103
Roche 454 FLX/FLX+
400–1000
Homopolymer errors
20–30 X
10−5
2 × 104
5 × 108
5
Illumina HiSeq2000 100–150 Typical error probability 0.01, Lower quality toward end of read 50–100 X 10−7 103 1010 1